STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_581X-Pro dipeptidyl-peptidase, S15 family; [U] COG0823 Periplasmic component of the Tol biopolymer transport system. (654 aa)    
Predicted Functional Partners:
NOR53_579
N-carbamoyl-L-amino acid hydrolase; [R] COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase.
 
     0.752
cinA
Competence/damage-inducible protein CinA; [R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
  
 
  0.696
NOR53_491
TPR repeat-containing protein; [R] COG0457 FOG: TPR repeat.
 
     0.612
NOR53_477
TPR repeat-containing protein; [R] COG0457 FOG: TPR repeat.
 
     0.601
NOR53_617
Putative esterase.
 
     0.523
EED33466.1
Amidohydrolase; [Q] COG1228 Imidazolonepropionase and related amidohydrolases.
  
     0.422
NOR53_787
Hypothetical protein.
  
     0.422
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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