STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_583Peptidase M1 family protein; [E] COG0308 Aminopeptidase N. (613 aa)    
Predicted Functional Partners:
NOR53_568
Xaa-Pro aminopeptidase family enzyme.
  
 
 0.631
EED31850.1
Peptidase M28; [R] COG2234 Predicted aminopeptidases.
  
 
 0.525
pepA
Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 0.482
EED33026.1
Peptidase M28; [R] COG2234 Predicted aminopeptidases.
  
 
 0.477
aspC
[E] COG1448 Aspartate/tyrosine/aromatic aminotransferase.
    
 0.468
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.465
pepN-2
[E] COG0308 Aminopeptidase N.
  
     0.458
dndA
Cysteine desulfurase DndA; [E] COG0520 Selenocysteine lyase.
  
 
  0.456
NOR53_645
[E] COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
       0.456
EED32603.1
Cysteine desulfurase; [R] COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes.
  
 
  0.453
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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