Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
NOR53_596Conserved hypothetical protein. (624 aa)    
Predicted Functional Partners:
hsdM
[V] COG0286 Type I restriction-modification system methyltransferase subunit.
 
  
 0.932
NOR53_449
Restriction modification system DNA specificity domain protein; [V] COG0732 Restriction endonuclease S subunits.
 
    0.929
NOR53_461
EcoEI R C-terminal domain protein; [V] COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
 
     0.917
EED33406.1
[G] COG1175 ABC-type sugar transport systems, permease components.
     
  0.531
EED33405.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC 1; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
     
  0.477
EED33404.1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC 3; [G] COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
     
  0.477
oppF
Oligopeptide ABC transporter, ATP-binding protein; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
     
  0.477
yejF
Oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein; [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
     
  0.477
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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