STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_616[K] COG2207 AraC-type DNA-binding domain-containing proteins. (363 aa)    
Predicted Functional Partners:
NOR53_283
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.774
EED31114.1
Hypothetical protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins; putative transcriptional regulatorAraC family taxon:167879.
  
     0.772
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
    
  0.646
EED33454.1
Putative Phosphate acetyl/butyryl transferase subfamily; [C] COG0281 Malic enzyme.
   
 
  0.608
NOR53_515
Ferredoxin; [C] COG2871 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF.
       0.541
NOR53_537
Linalool 8-monooxygenase; [Q] COG2124 Cytochrome P450.
 
     0.530
NOR53_624
[S] COG3012 Uncharacterized protein conserved in bacteria; Belongs to the UPF0225 family.
       0.404
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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