STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_627Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (470 aa)    
Predicted Functional Partners:
NOR53_525
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
    0.859
EED33556.1
Conserved hypothetical protein.
  
    0.713
EED31627.1
Putative calcium binding signal peptide protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
   0.696
EED34039.1
Putative NADH oxidase; [C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
     
 0.672
fadH
2,4-dienoyl-CoA reductase; [ER] COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
     
 0.672
EED33674.1
[I] COG0657 Esterase/lipase.
 
 
 0.563
EED31446.1
Haloalkane dehalogenase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
   0.560
NOR53_928
Antibiotic biosynthesis monooxygenase domain protein; [S] COG1359 Uncharacterized conserved protein.
  
     0.487
lys1_3
Saccharopine dehydrogenase; [S] COG3268 Uncharacterized conserved protein.
  
     0.462
EED31790.1
Alpha/beta hydrolase fold-3 domain protein; [I] COG0657 Esterase/lipase.
 
 
 0.457
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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