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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_631Putative gluconate 2-dehydrogenase flavoprotein; [E] COG2303 Choline dehydrogenase and related flavoproteins. (555 aa)    
Predicted Functional Partners:
EED33989.1
[C] COG2010 Cytochrome c, mono- and diheme variants.
 
   0.929
EED31759.1
Cytochrome c-type.
 
 
 
 0.913
EED33564.1
Gluconate 2-dehydrogenase cytochrome c subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.894
EED33169.1
Gluconate 2-dehydrogenase cytochrome c subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.893
NOR53_458
Hypothetical protein.
       0.773
mxaF
Methanol dehydrogenase protein, large subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
  
 0.747
NOR53_636
Alcohol dehydrogenase (acceptor); [S] COG1520 FOG: WD40-like repeat.
  
 0.747
EED32514.1
[P] COG0659 Sulfate permease and related transporters (MFS superfamily).
  
 0.730
NOR53_545
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.685
NOR53_937
Mandelate racemase/muconate lactonizing enzyme family protein; [MR] COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
 
  
  0.670
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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