Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NOR53_692DNA internalization-related competence protein ComEC/Rec2; [R] COG0658 Predicted membrane metal-binding protein. (732 aa)    
Predicted Functional Partners:
dprA
Peptide deformylase, DNA processing protein; [LU] COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
  
 0.903
pilD
Type IV pilus prepilin peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.891
EED32237.1
Phosphoribosyltransferase; [R] COG1040 Predicted amidophosphoribosyltransferases.
 
  
 0.891
EED33721.1
[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
  
  
 0.819
EED33058.1
[U] COG0848 Biopolymer transport protein.
       0.809
EED32126.1
Hamp domain protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
  
  
 0.802
EED33756.1
Competence protein ComEA helix-hairpin-helix repeat region; [K] COG2183 Transcriptional accessory protein.
 
  
 0.801
EED33059.1
MotA/TolQ/ExbB proton channel; [U] COG0811 Biopolymer transport proteins.
  
    0.786
EED32918.1
Cell division protein FtsK; [D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
  
 0.768
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.753
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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