STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_698[P] COG2375 Siderophore-interacting protein. (250 aa)    
Predicted Functional Partners:
EED33927.1
Toxin secretion ABC transporter permease and ATP-binding protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
   
  0.908
EED31327.1
Toxin secretion ABC transporter ATP-binding protein; [CO] COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components.
   
  0.908
EED32868.1
Hypothetical protein.
       0.569
NOR53_806
Transcriptional regulator, MarR family; [K] COG1846 Transcriptional regulators.
 
     0.438
hmuT
Hemin ABC transporter, periplasmic hemin-binding protein; [P] COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
    0.435
EED32324.1
Putative aralkylamine dehydrogenase heavy chain.
   
    0.418
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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