STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_699Conserved hypothetical protein; Displays ATPase and GTPase activities. (284 aa)    
Predicted Functional Partners:
NOR53_694
Nitrogen regulatory protein (Enzyme IIA-NTR); [GT] COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
  
 0.960
cafA
Hypothetical protein; [J] COG1530 Ribonucleases G and E; ibonuclease G.
 
 
 
 0.914
raiA
Ribosomal subunit interface protein; [J] COG1544 Ribosome-associated protein Y (PSrp-1).
 
  
 0.914
rne
Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.
 
 
 
 0.860
ptsH
Phosphocarrier protein HPr; [G] COG1925 Phosphotransferase system, HPr-related proteins.
  
  
 0.805
NOR53_486
[E] COG0531 Amino acid transporters.
  
  
 0.742
EED33891.1
[S] COG3028 Uncharacterized protein conserved in bacteria; Belongs to the UPF0307 family.
       0.731
mgtE
Magnesium transporter; Acts as a magnesium transporter.
       0.731
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.666
NOR53_611
Nucleotidyltransferase; [G] COG0448 ADP-glucose pyrophosphorylase.
    
  0.616
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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