STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_716[GEPR] COG0477 Permeases of the major facilitator superfamily. (382 aa)    
Predicted Functional Partners:
EED34060.1
Drug resistance transporter, Bcr/CflA subfamily; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
  
     0.773
EED32530.1
[F] COG1957 Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family.
       0.689
add_2
Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
       0.689
hom
[E] COG0460 Homoserine dehydrogenase.
   
  0.660
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.590
EED33765.1
P-protein; [E] COG1605 Chorismate mutase.
  
 
 0.579
EED32529.1
[F] COG5042 Purine nucleoside permease.
       0.456
NOR53_944
Putative permease, MFS superfamily; [GEPR] COG0477 Permeases of the major facilitator superfamily.
  
    0.418
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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