STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_735Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase. (726 aa)    
Predicted Functional Partners:
NOR53_852
O-Antigen Polymerase family protein; [M] COG3307 Lipid A core - O-antigen ligase and related enzymes.
 
 
 0.861
EED33945.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
     0.822
EED33944.1
Glycosyl transferase, family 2; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
  0.787
EED33943.1
Conserved hypothetical protein.
 
     0.747
EED33947.1
Conserved hypothetical protein.
 
     0.721
NOR53_57
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; [G] COG0662 Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.719
EED33978.1
Putative UDP-glucose lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.718
EED33955.1
Glycosyl transferase, group 1 family; [M] COG0438 Glycosyltransferase.
  
     0.717
asnB
[E] COG0067 Glutamate synthase domain 1.
 
 
  0.681
EED33952.1
Polysaccharide biosynthesis protein; [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase.
  
 
  0.651
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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