STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_737Amino acid transporter protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (202 aa)    
Predicted Functional Partners:
EED32100.1
Phosphohydrolase; [S] COG3151 Uncharacterized protein conserved in bacteria.
  
     0.729
ccoQ
[O] COG4736 Cbb3-type cytochrome oxidase, subunit 3.
 
     0.612
ccoP
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
    0.592
NOR53_771
[S] COG3139 Uncharacterized protein conserved in bacteria.
  
     0.563
EED32706.1
Transcriptional activator Anr; [T] COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
     0.561
ccoN
[C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
       0.527
ccoO
[C] COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
       0.526
EED32715.1
Anti-sigma factor MucA; [T] COG3073 Negative regulator of sigma E activity.
  
     0.513
EED32059.1
Putative conserved hypothetical protein; [R] COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.502
EED32699.1
[S] COG3198 Uncharacterized protein conserved in bacteria.
 
     0.488
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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