STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_747[S] COG0432 Uncharacterized conserved protein. (144 aa)    
Predicted Functional Partners:
EED32963.1
Conserved hypothetical protein.
       0.714
EED32964.1
Sodium/sulphate symporter; [P] COG1055 Na+/H+ antiporter NhaD and related arsenite permeases.
       0.709
EED31841.1
[S] COG2315 Uncharacterized protein conserved in bacteria; protein containing.
  
  
 0.610
uppS
Undecaprenyl pyrophosphate synthetase 1; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.
    
  0.584
EED32965.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
       0.482
EED32967.1
Zinc carboxypeptidase family; [E] COG2866 Predicted carboxypeptidase.
 
     0.469
NOR53_795
Auxin Efflux Carrier; [R] COG0679 Predicted permeases.
       0.441
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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