STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_750[M] COG2951 Membrane-bound lytic murein transglycosylase B. (402 aa)    
Predicted Functional Partners:
bax
Bax protein; [R] COG2992 Uncharacterized FlgJ-related protein.
 
     0.828
dacA
D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein 5; [M] COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
 
 0.818
amiB
[M] COG0860 N-acetylmuramoyl-L-alanine amidase.
    
 0.795
EED33675.1
[G] COG0726 Predicted xylanase/chitin deacetylase.
     
 0.775
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
 0.737
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
    
 0.726
glk_1
Glucokinase; [G] COG0837 Glucokinase; Belongs to the bacterial glucokinase family.
  
  
  0.719
NOR53_231
[G] COG1109 Phosphomannomutase.
  
  
  0.697
pgi
[G] COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.683
EED33441.1
Khg/kdpg aldolase; [G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase.
    
  0.656
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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