STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_757Auxin Efflux Carrier; [R] COG0679 Predicted permeases. (299 aa)    
Predicted Functional Partners:
EED33454.1
Putative Phosphate acetyl/butyryl transferase subfamily; [C] COG0281 Malic enzyme.
  
  
 0.865
EED34018.1
[R] COG2070 Dioxygenases related to 2-nitropropane dioxygenase.
       0.658
EED34020.1
Short-chain dehydrogenase/reductase SDR; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.565
NOR53_795
Auxin Efflux Carrier; [R] COG0679 Predicted permeases.
  
   
 0.528
EED31840.1
[C] COG0584 Glycerophosphoryl diester phosphodiesterase.
    
  0.451
EED34021.1
[S] COG3686 Predicted membrane protein.
       0.442
NOR53_884
TM2 domain family protein; [S] COG2314 Predicted membrane protein.
       0.425
EED34017.1
[R] COG2366 Protein related to penicillin acylase.
       0.410
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.