STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_763Methyltransferase type 11; [R] COG4798 Predicted methyltransferase. (267 aa)    
Predicted Functional Partners:
NOR53_781
Hypothetical cytosolic protein; [S] COG3089 Uncharacterized protein conserved in bacteria.
       0.780
EED33189.1
Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.665
EED33258.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.664
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.661
EED31857.1
Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat.
  
     0.654
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
       0.623
NOR53_847
Diaminobutyrate-2-oxoglutarate transaminase; [S] COG3101 Uncharacterized protein conserved in bacteria.
       0.623
NOR53_42
Conserved hypothetical protein.
  
     0.618
tusA
SirA protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
       0.615
NOR53_712
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.596
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.