STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
NOR53_798Putative rhodanese domain protein; [R] COG2391 Predicted transporter component. (399 aa)    
Predicted Functional Partners:
EED32536.1
Nickel-dependent hydrogenases b-type cytochrome subunit family; [C] COG1969 Ni,Fe-hydrogenase I cytochrome b subunit.
 
  
  0.968
EED32535.1
Conserved hypothetical protein; [R] COG2391 Predicted transporter component.
 
    0.949
EED32537.1
[C] COG2863 Cytochrome c553.
 
   
 0.934
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.772
EED32274.1
YeeE/YedE family protein; [R] COG2391 Predicted transporter component; overlaps another CDS with the same product name.
 
  
 0.772
EED31467.1
[C] COG2863 Cytochrome c553.
  
 
 0.738
EED32280.1
Cytochrome c, class I; [C] COG3245 Cytochrome c5.
 
  
  0.701
EED32130.1
Selenide, water dikinase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
     
 0.691
EED32969.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
    
 0.688
petB
ubiquinol-Cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
  0.686
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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