STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celDGlucan 1,4-beta-glucosidase; [G] COG1472 Beta-glucosidase-related glycosidases. (608 aa)    
Predicted Functional Partners:
bglX
[G] COG1472 Beta-glucosidase-related glycosidases.
 
    
0.788
EED31372.1
Glycosyl hydrolase, family 16.
 
 
 0.715
EED33559.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.589
NOR53_998
Putative alpha-galactosidase 2 (Melibiase); [G] COG3345 Alpha-galactosidase.
  
  
 0.562
EED33563.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.557
EED33452.1
Conserved hypothetical protein; [S] COG5523 Predicted integral membrane protein.
       0.512
NOR53_979
Transcription factor jumonji/aspartyl beta-hydroxylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.501
EED31609.1
Transcription factor jumonji/aspartyl beta-hydroxylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.489
EED32254.1
Conserved hypothetical protein.
  
  
 0.476
glk_2
Glucokinase/transcriptional regulator, RpiR family, fusion; [M] COG0794 Predicted sugar phosphate isomerase involved in capsule formation.
 
 
 0.452
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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