STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_824Glycosyl hydrolase, BNR repeat; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (1087 aa)    
Predicted Functional Partners:
EED33720.1
Succinylglutamate desuccinylase/aspartoacylase; [R] COG3608 Predicted deacylase.
 
     0.800
EED33721.1
[J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
 
 
  0.706
EED32033.1
Conserved hypothetical protein.
  
     0.614
NOR53_592
Conserved hypothetical protein.
  
     0.561
EED33718.1
Putative MltA-interacting protein MipA; [M] COG3713 Outer membrane protein V.
       0.510
EED34017.1
[R] COG2366 Protein related to penicillin acylase.
  
     0.487
EED33532.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.444
NOR53_232
Hypothetical protein.
  
     0.406
EED32141.1
Conserved hypothetical protein.
  
     0.403
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.