STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_847Diaminobutyrate-2-oxoglutarate transaminase; [S] COG3101 Uncharacterized protein conserved in bacteria. (189 aa)    
Predicted Functional Partners:
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
 
     0.839
tusA
SirA protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
       0.774
NOR53_781
Hypothetical cytosolic protein; [S] COG3089 Uncharacterized protein conserved in bacteria.
       0.629
NOR53_763
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
       0.623
efp
Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.
  
   
 0.509
NOR53_729
ApbE family protein; [S] COG2991 Uncharacterized protein conserved in bacteria.
  
     0.480
NOR53_771
[S] COG3139 Uncharacterized protein conserved in bacteria.
  
     0.476
EED32265.1
Lysine 2,3-aminomutase YodO family protein; [E] COG1509 Lysine 2,3-aminomutase.
  
   
 0.459
EED32820.1
Amino acid-binding ACT domain protein; [E] COG2716 Glycine cleavage system regulatory protein.
       0.451
EED33109.1
tRNA--hydroxylase; [FJ] COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA.
  
     0.448
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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