STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_852O-Antigen Polymerase family protein; [M] COG3307 Lipid A core - O-antigen ligase and related enzymes. (417 aa)    
Predicted Functional Partners:
EED33978.1
Putative UDP-glucose lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.967
EED33952.1
Polysaccharide biosynthesis protein; [J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase.
 
  
 0.876
NOR53_735
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
 
 0.861
EED33947.1
Conserved hypothetical protein.
 
     0.849
EED33965.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.832
EED33960.1
Sugar transferase, PEP-CTERM/EpsH1 system associated; [M] COG0438 Glycosyltransferase.
 
 
 0.819
EED33931.1
Conserved hypothetical protein.
 
  
 0.812
EED33964.1
Polysaccharide chain length determinant protein; [L] COG0419 ATPase involved in DNA repair.
 
  
 0.799
NOR53_682
Eight transmembrane protein EpsH; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.792
EED33951.1
Putative acyltransferase protein; [I] COG1835 Predicted acyltransferases.
     
 0.788
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.