Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EED32466.1 | EED32685.1 | NOR53_1092 | NOR53_1626 | [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type). | [L] COG2927 DNA polymerase III, chi subunit. | 0.956 |
| EED32466.1 | NOR53_853 | NOR53_1092 | NOR53_853 | [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type). | [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.742 |
| EED32466.1 | dnaN | NOR53_1092 | NOR53_3590 | [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type). | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.970 |
| EED32466.1 | dnaQ | NOR53_1092 | NOR53_1459 | [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type). | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.958 |
| EED32466.1 | dnaX | NOR53_1092 | NOR53_2018 | [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type). | DNA polymerase III, tau and gamma subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.965 |
| EED32466.1 | holA | NOR53_1092 | NOR53_2484 | [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type). | [L] COG1466 DNA polymerase III, delta subunit. | 0.959 |
| EED32466.1 | holB | NOR53_1092 | NOR53_1543 | [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type). | [L] COG2812 DNA polymerase III, gamma/tau subunits. | 0.956 |
| EED32646.1 | EED32648.1 | NOR53_1540 | NOR53_1527 | Sodium/solute symporter family protein; [ER] COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Cyclic nucleotide-binding protein; [R] COG0517 FOG: CBS domain. | 0.975 |
| EED32646.1 | NOR53_853 | NOR53_1540 | NOR53_853 | Sodium/solute symporter family protein; [ER] COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.706 |
| EED32648.1 | EED32646.1 | NOR53_1527 | NOR53_1540 | Cyclic nucleotide-binding protein; [R] COG0517 FOG: CBS domain. | Sodium/solute symporter family protein; [ER] COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.975 |
| EED32648.1 | NOR53_853 | NOR53_1527 | NOR53_853 | Cyclic nucleotide-binding protein; [R] COG0517 FOG: CBS domain. | [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.958 |
| EED32685.1 | EED32466.1 | NOR53_1626 | NOR53_1092 | [L] COG2927 DNA polymerase III, chi subunit. | [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type). | 0.956 |
| EED32685.1 | NOR53_853 | NOR53_1626 | NOR53_853 | [L] COG2927 DNA polymerase III, chi subunit. | [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | 0.675 |
| EED32685.1 | dnaE2 | NOR53_1626 | NOR53_2822 | [L] COG2927 DNA polymerase III, chi subunit. | Putative DNA polymerase III alpha subunit subfamily; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. | 0.945 |
| EED32685.1 | dnaN | NOR53_1626 | NOR53_3590 | [L] COG2927 DNA polymerase III, chi subunit. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.951 |
| EED32685.1 | dnaQ | NOR53_1626 | NOR53_1459 | [L] COG2927 DNA polymerase III, chi subunit. | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.733 |
| EED32685.1 | dnaX | NOR53_1626 | NOR53_2018 | [L] COG2927 DNA polymerase III, chi subunit. | DNA polymerase III, tau and gamma subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.984 |
| EED32685.1 | holA | NOR53_1626 | NOR53_2484 | [L] COG2927 DNA polymerase III, chi subunit. | [L] COG1466 DNA polymerase III, delta subunit. | 0.974 |
| EED32685.1 | holB | NOR53_1626 | NOR53_1543 | [L] COG2927 DNA polymerase III, chi subunit. | [L] COG2812 DNA polymerase III, gamma/tau subunits. | 0.984 |
| NOR53_853 | EED32466.1 | NOR53_853 | NOR53_1092 | [L] COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases. | [L] COG2176 DNA polymerase III, alpha subunit (gram-positive type). | 0.742 |
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