STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_87Methyltransferase domain family protein; [QR] COG0500 SAM-dependent methyltransferases. (224 aa)    
Predicted Functional Partners:
NOR53_245
Hypothetical protein; [V] COG0842 ABC-type multidrug transport system, permease component; ABC-2.
 
     0.791
NOR53_1
Teichoic acids export ATP-binding protein TagH; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.787
EED32012.1
Conserved hypothetical protein.
  
     0.542
ribB
Riboflavin biosynthesis protein ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.504
NOR53_60
Riboflavin biosynthesis protein ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
    
  0.504
NOR53_47
Glycosyl transferase, family 2; [M] COG0438 Glycosyltransferase.
       0.460
EED31219.1
Putative FAD dependent oxidoreductase; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
  
  
  0.402
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.