Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_883[K] COG2207 AraC-type DNA-binding domain-containing proteins. (307 aa)    
Predicted Functional Partners:
ligB_1
Protocatechuate 4,5-dioxygenase beta chain; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.708
ligA_3
Protocatechuate 4,5-dioxygenase, alpha subunit.
 
     0.680
EED31823.1
AraC protein, arabinose-binding/dimerisation; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.625
EED31455.1
Transcriptional regulator, AraC family; [T] COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
  
     0.597
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
     
 0.596
EED33454.1
Putative Phosphate acetyl/butyryl transferase subfamily; [C] COG0281 Malic enzyme.
  
  
 0.580
EED33246.1
Hypothetical protein; [K] COG2207 AraC-type DNA-binding domain-containing proteins; helix-turn-helix, AraC type.
  
   0.570
EED32842.1
Transcriptional regulator, LysR family; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
    0.532
EED31664.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
     
  0.502
NOR53_651
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.460
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.