Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yhjA[P] COG1858 Cytochrome c peroxidase. (331 aa)    
Predicted Functional Partners:
mauA
Methylamine dehydrogenase light chain; Belongs to the aromatic amine dehydrogenase light chain family.
 
 
   0.677
NOR53_850
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.593
EED32324.1
Putative aralkylamine dehydrogenase heavy chain.
 
 
 0.559
EED32695.1
OmpW family protein; [M] COG3047 Outer membrane protein W.
   
    0.511
EED33353.1
Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
       0.502
hemN
Oxygen-independent coproporphyrinogen III oxidase; [KB] COG1243 Histone acetyltransferase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
    0.481
EED33350.1
YaeQ; [S] COG4681 Uncharacterized protein conserved in bacteria.
  
    0.472
NOR53_889
Agmatine deiminase; [E] COG2957 Peptidylarginine deiminase and related enzymes; Belongs to the agmatine deiminase family.
       0.432
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.