STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maf_1Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily. (200 aa)    
Predicted Functional Partners:
NOR53_632
[L] COG2003 DNA repair proteins; Belongs to the UPF0758 family.
 
  
 0.656
EED31926.1
[L] COG2003 DNA repair proteins; Belongs to the UPF0758 family.
 
  
 0.654
EED32245.1
[L] COG2003 DNA repair proteins; Belongs to the UPF0758 family.
 
  
 0.653
EED33014.1
Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.
       0.556
rpmF
[J] COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
       0.556
mreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.553
fabD
[I] COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
   
 0.491
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
  
     0.485
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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