STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_908[P] COG4771 Outer membrane receptor for ferrienterochelin and colicins. (879 aa)    
Predicted Functional Partners:
EED33341.1
Transporter, OMR family; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.702
EED33230.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.686
EED33652.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.657
EED33022.1
TonB-dependent receptor, plug; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.652
EED33563.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.647
EED31061.1
TonB-dependent receptor, plug; Overlaps another CDS with the same product name.
  
     0.617
EED31834.1
[P] COG4772 Outer membrane receptor for Fe3+-dicitrate.
  
     0.610
EED32869.1
TonB-dependent receptor, plug; [H] COG4206 Outer membrane cobalamin receptor protein.
  
    0.609
EED33382.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.601
EED33559.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.597
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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