Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NOR53_913Regulatory protein, LuxR; [K] COG2771 DNA-binding HTH domain-containing proteins. (203 aa)    
Predicted Functional Partners:
NOR53_215
[T] COG0642 Signal transduction histidine kinase.
  
 0.990
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
  
 0.987
EED33682.1
[T] COG0642 Signal transduction histidine kinase.
  
 0.984
NOR53_690
Hypothetical protein.
  
 0.897
EED33926.1
HlyD family secretion protein; [M] COG0845 Membrane-fusion protein.
 
  
 0.848
EED33927.1
Toxin secretion ABC transporter permease and ATP-binding protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
    0.839
EED32126.1
Hamp domain protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
  
 0.778
EED32335.1
Hypothetical protein; [T] COG2200 FOG: EAL domain; pas:ggdef.
  
 0.739
NOR53_724
Hypothetical protein; [T] COG2200 FOG: EAL domain; pas:ggdef.
  
 0.739
EED31395.1
Sensor histidine kinase/response regulator; [T] COG0642 Signal transduction histidine kinase.
  
 0.663
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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