Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NOR53_918Glycosyl hydrolase; [R] COG4447 Uncharacterized protein related to plant photosystem II stability/assembly factor. (368 aa)    
Predicted Functional Partners:
EED33142.1
Patched family protein; [V] COG0841 Cation/multidrug efflux pump.
 
  
 0.987
EED33144.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
  
 0.964
NOR53_927
Type V secretory pathway, adhesin AidA; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
    0.938
EED32831.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.514
EED33558.1
Conserved hypothetical protein; [S] COG3821 Predicted membrane protein.
  
     0.460
NOR53_140
Anti-sigma-28 factor, FlgM superfamily; [KNU] COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
  
     0.442
EED33972.1
Patched family protein; [R] COG4258 Predicted exporter.
 
    0.440
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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