STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_944Putative permease, MFS superfamily; [GEPR] COG0477 Permeases of the major facilitator superfamily. (380 aa)    
Predicted Functional Partners:
EED33428.1
[G] COG1874 Beta-galactosidase.
       0.753
hom
[E] COG0460 Homoserine dehydrogenase.
   
  0.660
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.590
EED34060.1
Drug resistance transporter, Bcr/CflA subfamily; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
  
    0.585
EED33765.1
P-protein; [E] COG1605 Chorismate mutase.
   
 
 0.572
EED33663.1
Major facilitator family transporter; [G] COG2814 Arabinose efflux permease.
  
   
 0.536
EED33426.1
Renal dipeptidase family protein; [E] COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog.
       0.531
galT
[C] COG1085 Galactose-1-phosphate uridylyltransferase.
     
 0.530
EED33429.1
Galactokinase; [I] COG1577 Mevalonate kinase; Belongs to the GHMP kinase family. GalK subfamily.
       0.525
EED33431.1
SSS sodium solute transporter superfamily; [ER] COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.525
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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