STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_955[M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). (635 aa)    
Predicted Functional Partners:
EED33162.1
[M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
    0.801
EED33161.1
[S] COG3222 Uncharacterized protein conserved in bacteria.
       0.787
amiB
[M] COG0860 N-acetylmuramoyl-L-alanine amidase.
  
 
 0.643
NOR53_256
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.571
fliI
Flagellar protein export ATPase FliI; [C] COG0056 F0F1-type ATP synthase, alpha subunit.
  
  
 0.555
fliE
[NU] COG1677 Flagellar hook-basal body protein.
  
  
 0.551
EED33164.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.532
NOR53_141
Surface presentation of antigens protein; [N] COG1868 Flagellar motor switch protein.
  
    0.518
flgE
[N] COG4786 Flagellar basal body rod protein.
  
    0.516
EED31506.1
Lytic transglycosylase, catalytic; [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
   
 0.451
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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