Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NOR53_964Hyaluronidase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (350 aa)    
Predicted Functional Partners:
EED33428.1
[G] COG1874 Beta-galactosidase.
 
 
 0.667
NOR53_998
Putative alpha-galactosidase 2 (Melibiase); [G] COG3345 Alpha-galactosidase.
  
  
 0.592
EED32963.1
Conserved hypothetical protein.
    
 0.551
NOR53_132
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
  0.534
fadD_1
long-chain-fatty-acid--CoA ligase; [I] COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
    
  0.534
EED32666.1
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
  0.534
EED33386.1
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
  0.534
EED33542.1
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
  0.534
EED31142.1
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
  0.534
NOR53_280
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
    
  0.534
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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