STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tusDSulfur relay protein TusD/DsrE; [P] COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction. (124 aa)    
Predicted Functional Partners:
NOR53_879
DsrE/DsrF-like family protein; [P] COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur.
 
 0.999
dsrH
Sulfur relay protein TusB/DsrH.
  
 
 0.995
EED33033.1
Sulfurtransferase TusE; Part of a sulfur-relay system.
 
 
 0.975
NOR53_165
Conserved hypothetical protein; [O] COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
 
 
 0.921
tusA
SirA protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
 
 
 0.904
trmA
tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).
       0.678
EED33029.1
[R] COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family.
       0.610
EED33014.1
Conserved hypothetical protein; [R] COG1399 Predicted metal-binding, possibly nucleic acid-binding protein.
  
     0.550
EED32281.1
Sulfur oxidation protein SoxX; [C] COG2010 Cytochrome c, mono- and diheme variants.
  
     0.527
soxZ
Sulfur oxidation protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
   
 0.517
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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