STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPF20395.1D-allose transport system permease protein AlsC; KEGG: ecl:EcolC_3940 4.2e-153 D-allose transporter subunit K10550; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (320 aa)    
Predicted Functional Partners:
EPF20396.1
Allose transport protein, AlsA ABC superfamily; KEGG: cko:CKO_03786 4.0e-244 D-allose transporter ATP-binding protein; K10551 D-allose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
     0.946
EPF20397.1
D-allose-binding periplasmic protein; KEGG: ecl:EcolC_3938 2.3e-145 D-allose transporter subunit K10549; Psort location: Periplasmic, score: 10.00.
 0.944
rbsA-2
Ribose transport ATP-binding protein rbsa; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.905
EPF18025.1
KEGG: kpe:KPK_3935 9.0e-215 sugar ABC transporter, ATP-binding protein; K02056 simple sugar transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.904
EPF13793.1
Putative sugar ABC transporter, ATP binding protein; KEGG: enc:ECL_03805 5.7e-245 rbsA; ribose transport system ATP-binding protein; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.902
EPF15863.1
KEGG: ctu:Ctu_28190 1.2e-251 mglA; galactose/methyl galaxtoside transporter ATP-binding protein K10542; Psort location: CytoplasmicMembrane, score: 10.00.
 0.899
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.898
EPF13076.1
D-ribose-binding periplasmic protein; KEGG: ecl:EcolC_4243 5.2e-132 D-ribose transporter subunit RbsB K10439; Psort location: Periplasmic, score: 10.00.
 0.898
xylG
D-xylose ABC transporter, ATP-binding protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 0.897
EPF13794.1
Sugar-binding domain protein; KEGG: ypg:YpAngola_A1874 6.9e-137 rbsB4; ribose ABC transporter periplasmic ribose-binding protein K10439; Psort location: Periplasmic, score: 10.00.
 0.893
Your Current Organism:
Cedecea davisae
NCBI taxonomy Id: 566551
Other names: C. davisae DSM 4568, Cedecea davisae ATCC 33431, Cedecea davisae DSM 4568, Cedecea davisae str. DSM 4568, Cedecea davisae strain 005, Cedecea davisae strain DSM 4568
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