Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EPF13833.1 | EPF20515.1 | HMPREF0201_04026 | HMPREF0201_00243 | Aromatic ring-opening dioxygenase, catalytic subunit LigB; KEGG: ddd:Dda3937_00723 5.5e-105 ygiD; putative dioxygenase. | Pirin family protein; Belongs to the pirin family. | 0.576 |
EPF20515.1 | EPF13833.1 | HMPREF0201_00243 | HMPREF0201_04026 | Pirin family protein; Belongs to the pirin family. | Aromatic ring-opening dioxygenase, catalytic subunit LigB; KEGG: ddd:Dda3937_00723 5.5e-105 ygiD; putative dioxygenase. | 0.576 |
EPF20515.1 | EPF20516.1 | HMPREF0201_00243 | HMPREF0201_00244 | Pirin family protein; Belongs to the pirin family. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.669 |
EPF20516.1 | EPF20515.1 | HMPREF0201_00244 | HMPREF0201_00243 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Pirin family protein; Belongs to the pirin family. | 0.669 |