STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPF20147.1AMP-binding enzyme; KEGG: ddd:Dda3937_03194 1.8e-234 D-alanine-activating protein K03367; Psort location: Cytoplasmic, score: 9.97. (477 aa)    
Predicted Functional Partners:
EPF20146.1
Hypothetical protein; KEGG: ooe:OEOE_0287 9.6e-05 D-alanyl transfer protein; K03367 D-alanine-poly(phosphoribitol) ligase.
  
 0.997
EPF20148.1
MBOAT family protein; KEGG: ddd:Dda3937_03195 3.4e-176 D-alanyl transfer protein DltB K03739; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the membrane-bound acyltransferase family.
 
  
 0.992
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; KEGG: yen:YE0734 2.8e-211 gsa, hemL, popC; glutamate-1-semialdehyde aminotransferase K01845; Psort location: Cytoplasmic, score: 9.97.
  
 0.988
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.980
EPF14987.1
Putative acyl carrier protein.
  
 0.980
EPF20645.1
Unspecific monooxygenase; Belongs to the cytochrome P450 family.
 
 0.952
EPF20150.1
Hypothetical protein.
  
  
 0.951
aas
Acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.951
EPF20761.1
Putative crotonobetaine/carnitine-CoA ligase.
0.944
EPF16227.1
CoA ligase; KEGG: eci:UTI89_C1999 3.7e-273 fadD; long-chain-fatty-acid--CoA ligase K01897; Psort location: Cytoplasmic, score: 9.97.
0.944
Your Current Organism:
Cedecea davisae
NCBI taxonomy Id: 566551
Other names: C. davisae DSM 4568, Cedecea davisae ATCC 33431, Cedecea davisae DSM 4568, Cedecea davisae str. DSM 4568, Cedecea davisae strain 005, Cedecea davisae strain DSM 4568
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