STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPF18101.1Biofilm formation regulatory protein BssS. (85 aa)    
Predicted Functional Partners:
EPF12921.1
Hypothetical protein.
  
   
 0.777
EPF17055.1
Hypothetical protein.
  
     0.774
EPF17711.1
Hypothetical protein.
  
     0.772
EPF18105.1
Hypothetical protein.
 
     0.769
tus
DNA replicatio site-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family.
  
     0.769
EPF20844.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
  
     0.767
EPF15020.1
Hypothetical protein.
  
    0.764
EPF16274.1
DNA polymerase III subunit theta.
  
     0.763
EPF15356.1
Hypothetical protein.
  
     0.760
EPF13771.1
Hypothetical protein.
  
     0.758
Your Current Organism:
Cedecea davisae
NCBI taxonomy Id: 566551
Other names: C. davisae DSM 4568, Cedecea davisae ATCC 33431, Cedecea davisae DSM 4568, Cedecea davisae str. DSM 4568, Cedecea davisae strain 005, Cedecea davisae strain DSM 4568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.