Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EPF17593.1 | EPF17594.1 | HMPREF0201_01950 | HMPREF0201_01951 | KEGG: bur:Bcep18194_A5087 1.6e-36 FAD dependent oxidoreductase. | Hypothetical protein; KEGG: ctc:CTC01157 8.9e-07 phosphoesterase K01175; Psort location: CytoplasmicMembrane, score: 10.00. | 0.525 |
EPF17593.1 | EPF17595.1 | HMPREF0201_01950 | HMPREF0201_01952 | KEGG: bur:Bcep18194_A5087 1.6e-36 FAD dependent oxidoreductase. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. | 0.466 |
EPF17594.1 | EPF17593.1 | HMPREF0201_01951 | HMPREF0201_01950 | Hypothetical protein; KEGG: ctc:CTC01157 8.9e-07 phosphoesterase K01175; Psort location: CytoplasmicMembrane, score: 10.00. | KEGG: bur:Bcep18194_A5087 1.6e-36 FAD dependent oxidoreductase. | 0.525 |
EPF17594.1 | EPF17595.1 | HMPREF0201_01951 | HMPREF0201_01952 | Hypothetical protein; KEGG: ctc:CTC01157 8.9e-07 phosphoesterase K01175; Psort location: CytoplasmicMembrane, score: 10.00. | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. | 0.678 |
EPF17595.1 | EPF17593.1 | HMPREF0201_01952 | HMPREF0201_01950 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. | KEGG: bur:Bcep18194_A5087 1.6e-36 FAD dependent oxidoreductase. | 0.466 |
EPF17595.1 | EPF17594.1 | HMPREF0201_01952 | HMPREF0201_01951 | Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. | Hypothetical protein; KEGG: ctc:CTC01157 8.9e-07 phosphoesterase K01175; Psort location: CytoplasmicMembrane, score: 10.00. | 0.678 |