STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPF17627.1Putative als operon regulatory protein AlsR; KEGG: shn:Shewana3_3435 3.8e-26 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; Belongs to the LysR transcriptional regulatory family. (300 aa)    
Predicted Functional Partners:
EPF20652.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.763
EPF19192.1
LysR substrate binding domain protein; KEGG: oan:Oant_4247 2.0e-36 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.721
EPF13942.1
LysR substrate binding domain protein; KEGG: spe:Spro_0526 2.3e-81 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
    0.717
EPF17802.1
LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
  
     0.702
EPF20357.1
LysR substrate binding domain protein; KEGG: bac:BamMC406_2577 1.8e-60 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.678
EPF13660.1
LysR substrate binding domain protein; KEGG: swd:Swoo_1123 1.8e-58 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.669
EPF18209.1
LysR substrate binding domain protein; KEGG: swd:Swoo_1123 8.0e-49 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.654
EPF20752.1
LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
  
    0.645
EPF19181.1
Putative HTH-type transcriptional activator AllS; KEGG: bcm:Bcenmc03_0145 1.3e-15 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.635
EPF13640.1
LysR substrate binding domain protein; KEGG: hiq:CGSHiGG_09680 2.6e-34 DNA-binding transcriptional activator GcvA K03566; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.633
Your Current Organism:
Cedecea davisae
NCBI taxonomy Id: 566551
Other names: C. davisae DSM 4568, Cedecea davisae ATCC 33431, Cedecea davisae DSM 4568, Cedecea davisae str. DSM 4568, Cedecea davisae strain 005, Cedecea davisae strain DSM 4568
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