Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPF17405.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
EPF17404.1
TonB family domain protein; KEGG: hip:CGSHiEE_01810 1.0e-07 bcp; TonB K03832.
 
     0.859
EPF17402.1
TonB-dependent heme/hemoglobin receptor family protein; KEGG: mct:MCR_0690 4.6e-07 tbpA; transferrin binding protein A TbpA; Psort location: OuterMembrane, score: 9.95.
 
  
 0.788
EPF17403.1
Protease 2; KEGG: spe:Spro_3467 3.4e-263 oligopeptidase B K01354; Psort location: Periplasmic, score: 9.44.
       0.583
EPF19109.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
 
  0.575
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
  
  
 0.570
EPF17406.1
Hypothetical protein; KEGG: bur:Bcep18194_B1706 4.2e-12 short-chain dehydrogenase/reductase SDR K07124.
       0.440
EPF13887.1
Hypothetical protein.
  
     0.439
EPF17579.1
Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA; Psort location: OuterMembrane, score: 9.52.
  
     0.437
EPF13745.1
Rieske [2Fe-2S] domain protein; KEGG: bpm:BURPS1710b_A2492 1.8e-26 hcaA12; Rieske (2Fe-2S) domain-containing protein K05710.
    
  0.431
EPF13133.1
KEGG: esa:ESA_04367 3.7e-44 nirD; nitrite reductase small subunit; K00363 nitrite reductase (NAD(P)H) small subunit; Psort location: Cytoplasmic, score: 9.26.
    
  0.431
Your Current Organism:
Cedecea davisae
NCBI taxonomy Id: 566551
Other names: C. davisae DSM 4568, Cedecea davisae ATCC 33431, Cedecea davisae DSM 4568, Cedecea davisae str. DSM 4568, Cedecea davisae strain 005, Cedecea davisae strain DSM 4568
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