close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPF17405.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
EPF17404.1
TonB family domain protein; KEGG: hip:CGSHiEE_01810 1.0e-07 bcp; TonB K03832.
 
  
 0.877
EPF17402.1
TonB-dependent heme/hemoglobin receptor family protein; KEGG: mct:MCR_0690 4.6e-07 tbpA; transferrin binding protein A TbpA; Psort location: OuterMembrane, score: 9.95.
 
  
 0.867
EPF19109.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
 
  0.740
EPF12832.1
TonB-dependent heme/hemoglobin receptor family protein; KEGG: mct:MCR_0690 2.1e-05 tbpA; transferrin binding protein A TbpA; Psort location: OuterMembrane, score: 10.00.
 
  
 0.629
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
  0.579
EPF17403.1
Protease 2; KEGG: spe:Spro_3467 3.4e-263 oligopeptidase B K01354; Psort location: Periplasmic, score: 9.44.
       0.571
EPF20868.1
KEGG: hse:Hsero_0986 1.5e-29 fbpC; TonB-dependent siderophore receptor protein K02014; Psort location: OuterMembrane, score: 10.00.
  
  
 0.525
EPF20166.1
Putative ferric malleobactin receptor FmtA; KEGG: hse:Hsero_0986 7.4e-19 fbpC; TonB-dependent siderophore receptor protein K02014; Psort location: OuterMembrane, score: 10.00.
  
  
 0.525
EPF18083.1
Ferrichrome receptor FcuA; KEGG: hse:Hsero_0986 2.6e-36 fbpC; TonB-dependent siderophore receptor protein K02014; Psort location: OuterMembrane, score: 10.00.
  
  
 0.525
EPF16202.1
TonB-dependent siderophore receptor; KEGG: sgl:SG1838 3.6e-28 putative mannonate dehydratase; K01686 mannonate dehydratase; Psort location: OuterMembrane, score: 9.93.
  
  
 0.525
Your Current Organism:
Cedecea davisae
NCBI taxonomy Id: 566551
Other names: C. davisae DSM 4568, Cedecea davisae ATCC 33431, Cedecea davisae DSM 4568, Cedecea davisae str. DSM 4568, Cedecea davisae strain 005, Cedecea davisae strain DSM 4568
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.