STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPF16985.1Hemin-degrading family protein; Psort location: Cytoplasmic, score: 9.97. (311 aa)    
Predicted Functional Partners:
EPF17761.1
Hemin-binding periplasmic protein HmuT.
 
  
 0.965
EPF20436.1
Periplasmic binding protein.
 
  
 0.961
hmuV
Hemin import ATP-binding protein HmuV; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
  
 0.871
EPF17763.1
TonB-dependent heme/hemoglobin receptor family protein.
 
  
 0.702
EPF17760.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.657
EPF16880.1
Siderophore-interacting FAD-binding domain protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.570
EPF12832.1
TonB-dependent heme/hemoglobin receptor family protein; KEGG: mct:MCR_0690 2.1e-05 tbpA; transferrin binding protein A TbpA; Psort location: OuterMembrane, score: 10.00.
 
  
 0.506
EPF18163.1
Siderophore-interacting FAD-binding domain protein.
  
    0.469
EPF16984.1
Putative HTH-type transcriptional regulator GltR; KEGG: spe:Spro_4684 1.0e-14 LysR family transcriptional regulator; Psort location: CytoplasmicMembrane, score: 8.46; Belongs to the LysR transcriptional regulatory family.
       0.458
EPF18036.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bgl:bglu_1g28200 1.3e-23 ABC-type cobalamin/Fe3 -siderophores transport systems ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.449
Your Current Organism:
Cedecea davisae
NCBI taxonomy Id: 566551
Other names: C. davisae DSM 4568, Cedecea davisae ATCC 33431, Cedecea davisae DSM 4568, Cedecea davisae str. DSM 4568, Cedecea davisae strain 005, Cedecea davisae strain DSM 4568
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