STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPF17056.1KEGG: kva:Kvar_2774 2.0e-84 diamine N-acetyltransferase K00657; Psort location: Cytoplasmic, score: 9.97. (185 aa)    
Predicted Functional Partners:
EPF17055.1
Hypothetical protein.
  
  
 0.948
EPF15995.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.822
EPF16582.1
KEGG: kva:Kvar_2922 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
    
  0.819
EPF14004.1
Putative glutamate synthase [NADPH], large subunit.
   
 
 0.774
EPF14948.1
Chorismate mutase.
    
  0.773
speB
Agmatinase; Catalyzes the formation of putrescine from agmatine. Belongs to the arginase family. Agmatinase subfamily.
     
 0.745
patA
Putrescine aminotransferase; Catalyzes the aminotransferase reaction from putrescine to 2- oxoglutarate, leading to glutamate and 4-aminobutanal, which spontaneously cyclizes to form 1-pyrroline. This is the first step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate (gamma-aminobutyrate or GABA) via 4- aminobutanal. Also functions as a cadaverine transaminase in a a L- lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.
   
 
 0.717
EPF12867.1
Acetyltransferase, GNAT family; KEGG: pva:Pvag_pPag10132 1.4e-42 putative acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.685
EPF18158.1
L-lysine 6-monooxygenase.
  
 
 0.629
EPF12791.1
Acetyltransferase, GNAT family; KEGG: ent:Ent638_3849 4.3e-57 GCN5-related N-acetyltransferase; K03825 putative acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.604
Your Current Organism:
Cedecea davisae
NCBI taxonomy Id: 566551
Other names: C. davisae DSM 4568, Cedecea davisae ATCC 33431, Cedecea davisae DSM 4568, Cedecea davisae str. DSM 4568, Cedecea davisae strain 005, Cedecea davisae strain DSM 4568
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