STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPF16664.1Adhesin HecA family 20-residue repeat-containing domain protein; KEGG: eci:UTI89_C4946 3.8e-98 ShlA/HecA/FhaA exofamily protein; Psort location: OuterMembrane, score: 8.42; overlaps another CDS with the same product name. (745 aa)    
Predicted Functional Partners:
EPF16666.1
POTRA domain protein, ShlB-type; KEGG: cco:CCC13826_0608 5.1e-38 ATP phosphoribosyltransferase (ATP-PRTase; ATP-PRT); Psort location: OuterMembrane, score: 10.00.
 
 0.990
EPF16663.1
Adhesin HecA family 20-residue repeat-containing domain protein; KEGG: eci:UTI89_C4946 0. ShlA/HecA/FhaA exofamily protein; Psort location: OuterMembrane, score: 9.95; overlaps another CDS with the same product name.
   
 0.959
EPF16665.1
Filamentous hemagglutinin family domain protein; KEGG: eci:UTI89_C4946 7.3e-220 ShlA/HecA/FhaA exofamily protein; Psort location: OuterMembrane, score: 9.95.
 
    
0.845
EPF16356.1
BcsX family protein.
   
 0.812
EPF15391.1
GDSL-like protein; KEGG: ecc:c0615 6.9e-98 tesA; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 K10804; Psort location: Periplasmic, score: 10.00.
   
 0.812
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.788
EPF16662.1
Hypothetical protein.
  
    0.776
EPF15581.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.706
EPF16867.1
Peptidase dimerization domain protein; KEGG: lme:LEUM_0429 1.1e-25 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase; Psort location: Cytoplasmic, score: 8.96.
  
     0.595
EPF15849.1
Outer membrane autotransporter barrel domain protein; KEGG: seh:SeHA_C0682 3.9e-253 lipase 1 K12686; Psort location: OuterMembrane, score: 9.83.
  
   
 0.570
Your Current Organism:
Cedecea davisae
NCBI taxonomy Id: 566551
Other names: C. davisae DSM 4568, Cedecea davisae ATCC 33431, Cedecea davisae DSM 4568, Cedecea davisae str. DSM 4568, Cedecea davisae strain 005, Cedecea davisae strain DSM 4568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.