STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5630_21050Unannotated protein. (211 aa)    
Predicted Functional Partners:
A5630_21055
Unannotated protein.
 
     0.871
A5630_11480
Unannotated protein.
    
 0.829
A5630_07325
Unannotated protein.
    
 0.829
GCA_001291445_01311
Unannotated protein.
    
 0.817
A5630_20535
Unannotated protein.
    
 0.817
A5630_02315
Unannotated protein.
    
 0.770
A5630_24505
Unannotated protein.
 
     0.763
A5630_28850
Unannotated protein.
    
 0.748
A5630_27035
Unannotated protein.
 
     0.745
rpsC
Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 0.705
Your Current Organism:
Mycolicibacterium mucogenicum
NCBI taxonomy Id: 56689
Other names: ATCC 49650, CCUG 47451, CDC 86-701, CIP 105223, DSM 44625, KCTC 19088, M. mucogenicum, Mycobacterium mucogenicum, strain MO76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.