STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5630_19325Unannotated protein. (358 aa)    
Predicted Functional Partners:
A5630_25820
Unannotated protein.
     
 0.942
A5630_06240
Unannotated protein; Belongs to the cytochrome P450 family.
   
 0.909
A5630_23285
Unannotated protein; Belongs to the cytochrome P450 family.
   
 0.909
A5630_01355
Unannotated protein.
     
 0.890
A5630_03275
Unannotated protein.
     
 0.888
A5630_17230
Unannotated protein.
     
 0.888
A5630_07380
Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 0.881
A5630_18295
Unannotated protein.
     
 0.875
rpsS
Unannotated protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.868
rpsL
Unannotated protein; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
   
 0.862
Your Current Organism:
Mycolicibacterium mucogenicum
NCBI taxonomy Id: 56689
Other names: ATCC 49650, CCUG 47451, CDC 86-701, CIP 105223, DSM 44625, KCTC 19088, M. mucogenicum, Mycobacterium mucogenicum, strain MO76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.