STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001291445_01936Unannotated protein. (248 aa)    
Predicted Functional Partners:
A5630_19360
Unannotated protein.
 
     0.804
A5630_19365
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
       0.773
A5630_19370
Unannotated protein.
       0.773
A5630_16370
Unannotated protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
 
  
 0.574
A5630_16265
Unannotated protein; Belongs to the Dps family.
  
  
 0.567
A5630_23205
Unannotated protein.
      
 0.560
A5630_25140
Unannotated protein.
  
  
  0.552
GCA_001291445_05637
Unannotated protein.
  
  
  0.523
fgd
Unannotated protein; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
  
  
  0.522
A5630_10800
Unannotated protein.
  
  
  0.519
Your Current Organism:
Mycolicibacterium mucogenicum
NCBI taxonomy Id: 56689
Other names: ATCC 49650, CCUG 47451, CDC 86-701, CIP 105223, DSM 44625, KCTC 19088, M. mucogenicum, Mycobacterium mucogenicum, strain MO76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.