STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001291445_03094Unannotated protein. (538 aa)    
Predicted Functional Partners:
GCA_001291445_03093
Unannotated protein.
 
     0.807
GCA_001291445_03089
Unannotated protein.
 
     0.671
GCA_001291445_03090
Unannotated protein.
       0.535
GCA_001291445_03091
Unannotated protein.
       0.535
GCA_001291445_03092
Unannotated protein.
       0.535
A5630_01565
Unannotated protein.
  
     0.452
pyrD
Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
    
  0.442
pyrB
Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
  0.440
A5630_03965
Unannotated protein.
  
     0.440
A5630_00640
Unannotated protein.
  
     0.429
Your Current Organism:
Mycolicibacterium mucogenicum
NCBI taxonomy Id: 56689
Other names: ATCC 49650, CCUG 47451, CDC 86-701, CIP 105223, DSM 44625, KCTC 19088, M. mucogenicum, Mycobacterium mucogenicum, strain MO76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.