Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A5630_20650 | A5630_21460 | GCA_001291445_04583 | GCA_001291445_04478 | Unannotated protein. | Unannotated protein. | 0.867 |
A5630_20650 | A5630_26140 | GCA_001291445_04583 | GCA_001291445_04484 | Unannotated protein. | Unannotated protein. | 0.823 |
A5630_20650 | A5630_26145 | GCA_001291445_04583 | GCA_001291445_04483 | Unannotated protein. | Unannotated protein. | 0.999 |
A5630_20650 | A5630_26150 | GCA_001291445_04583 | GCA_001291445_04482 | Unannotated protein. | Unannotated protein. | 0.999 |
A5630_20650 | A5630_26155 | GCA_001291445_04583 | GCA_001291445_04481 | Unannotated protein. | Unannotated protein. | 0.976 |
A5630_20650 | A5630_28035 | GCA_001291445_04583 | GCA_001291445_01408 | Unannotated protein. | Unannotated protein. | 0.851 |
A5630_20650 | gcvP-2 | GCA_001291445_04583 | GCA_001291445_05835 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.895 |
A5630_20650 | gcvT | GCA_001291445_04583 | GCA_001291445_00188 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.987 |
A5630_20650 | gcvT-2 | GCA_001291445_04583 | GCA_001291445_01109 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.972 |
A5630_20650 | glyA-3 | GCA_001291445_04583 | GCA_001291445_04485 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.656 |
A5630_21460 | A5630_20650 | GCA_001291445_04478 | GCA_001291445_04583 | Unannotated protein. | Unannotated protein. | 0.867 |
A5630_21460 | A5630_26140 | GCA_001291445_04478 | GCA_001291445_04484 | Unannotated protein. | Unannotated protein. | 0.920 |
A5630_21460 | A5630_26145 | GCA_001291445_04478 | GCA_001291445_04483 | Unannotated protein. | Unannotated protein. | 0.966 |
A5630_21460 | A5630_26150 | GCA_001291445_04478 | GCA_001291445_04482 | Unannotated protein. | Unannotated protein. | 0.799 |
A5630_21460 | A5630_26155 | GCA_001291445_04478 | GCA_001291445_04481 | Unannotated protein. | Unannotated protein. | 0.941 |
A5630_21460 | gcvP-2 | GCA_001291445_04478 | GCA_001291445_05835 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.742 |
A5630_21460 | gcvT | GCA_001291445_04478 | GCA_001291445_00188 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.454 |
A5630_21460 | gcvT-2 | GCA_001291445_04478 | GCA_001291445_01109 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.454 |
A5630_21460 | glyA-3 | GCA_001291445_04478 | GCA_001291445_04485 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.520 |
A5630_26140 | A5630_20650 | GCA_001291445_04484 | GCA_001291445_04583 | Unannotated protein. | Unannotated protein. | 0.823 |
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