STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5630_17070Unannotated protein; Belongs to the DNA photolyase family. (450 aa)    
Predicted Functional Partners:
A5630_24400
Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.829
ybeY
Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.804
A5630_14470
Unannotated protein.
    
   0.804
rpsQ
Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
    
   0.748
GCA_001291445_05722
Unannotated protein.
 
  
 0.711
A5630_26950
Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
   0.695
A5630_00165
Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
   0.695
A5630_07210
Unannotated protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
   0.695
A5630_11480
Unannotated protein.
  
 
 0.637
A5630_07325
Unannotated protein.
  
 
 0.637
Your Current Organism:
Mycolicibacterium mucogenicum
NCBI taxonomy Id: 56689
Other names: ATCC 49650, CCUG 47451, CDC 86-701, CIP 105223, DSM 44625, KCTC 19088, M. mucogenicum, Mycobacterium mucogenicum, strain MO76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.