Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A5630_00015 | A5630_00020 | GCA_001291445_01379 | GCA_001291445_01378 | Unannotated protein; Belongs to the LeuD family. | Unannotated protein. | 0.999 |
A5630_00015 | A5630_17275 | GCA_001291445_01379 | GCA_001291445_05381 | Unannotated protein; Belongs to the LeuD family. | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.815 |
A5630_00015 | ilvD | GCA_001291445_01379 | GCA_001291445_02855 | Unannotated protein; Belongs to the LeuD family. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.693 |
A5630_00015 | ilvD-2 | GCA_001291445_01379 | GCA_001291445_03227 | Unannotated protein; Belongs to the LeuD family. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.639 |
A5630_00015 | leuB | GCA_001291445_01379 | GCA_001291445_00885 | Unannotated protein; Belongs to the LeuD family. | Unannotated protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. | 0.993 |
A5630_00015 | leuC | GCA_001291445_01379 | GCA_001291445_00864 | Unannotated protein; Belongs to the LeuD family. | Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.991 |
A5630_00020 | A5630_00015 | GCA_001291445_01378 | GCA_001291445_01379 | Unannotated protein. | Unannotated protein; Belongs to the LeuD family. | 0.999 |
A5630_00020 | A5630_17275 | GCA_001291445_01378 | GCA_001291445_05381 | Unannotated protein. | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.815 |
A5630_00020 | ilvD | GCA_001291445_01378 | GCA_001291445_02855 | Unannotated protein. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.923 |
A5630_00020 | ilvD-2 | GCA_001291445_01378 | GCA_001291445_03227 | Unannotated protein. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.888 |
A5630_00020 | leuB | GCA_001291445_01378 | GCA_001291445_00885 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 2 subfamily. | 0.996 |
A5630_00020 | leuC | GCA_001291445_01378 | GCA_001291445_00864 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.845 |
A5630_00020 | leuD | GCA_001291445_01378 | GCA_001291445_00863 | Unannotated protein. | Unannotated protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.999 |
A5630_03130 | A5630_17275 | GCA_001291445_03906 | GCA_001291445_05381 | Unannotated protein; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.904 |
A5630_17275 | A5630_00015 | GCA_001291445_05381 | GCA_001291445_01379 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein; Belongs to the LeuD family. | 0.815 |
A5630_17275 | A5630_00020 | GCA_001291445_05381 | GCA_001291445_01378 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein. | 0.815 |
A5630_17275 | A5630_03130 | GCA_001291445_05381 | GCA_001291445_03906 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds. | 0.904 |
A5630_17275 | A5630_29340 | GCA_001291445_05381 | GCA_001291445_03117 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein. | 0.757 |
A5630_17275 | GCA_001291445_01531 | GCA_001291445_05381 | GCA_001291445_01531 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein. | 0.904 |
A5630_17275 | ilvD | GCA_001291445_05381 | GCA_001291445_02855 | Unannotated protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.808 |
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